http://www.metagenomics.wiki/pdf/definition/alpha-beta-diversity

How are the microbes balanced to each other? Do we have species evenness ( similar abundance level) or do some species dominate others? Shannon index ...

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6069118/

Jul 31, 2018 ... The patterns of microbiome diversity, pathogenic or commensal, among individuals, within host species, or between host species have not ...

https://richardsprague.com/note/2018/05/10/how-to-think-about-microbiome-diversity/

May 10, 2018 ... Many scientific studies are interested in the differences between sites on the body, or microbiomes across geographic locations. Beta diversity ...

https://www.youtube.com/watch?v=lcbp6EecDg4

Jan 29, 2016 ... Microbiome Discovery 8: Beta Diversity. Dan Knights. Loading. ... I have a question, what about beta partition? How much is nested? shared?

https://microbiome.github.io/microbiome/Betadiversity.html

Some examples on calculating beta diversity and using it to quantify community divergence within a given sample set. See Community comparisons page for ...

https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1002808

Beta diversity can be measured by simple taxa overlap or ... is still an essential early step in any microbiome analysis.

https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0200728

Jul 12, 2018 ... There is growing appreciation for the fact that the gut microbiome might ..... Beta diversity and correlated species were examined by RDA on ...

https://www.frontiersin.org/articles/10.3389/fmicb.2018.01037/full

... of the most popular in microbiome studies include Jaccard, Bray-Curtis, ... The calculation of beta diversity indices for all combinations of pairs ... In order to evaluate beta diversity indices at the subject level and ...

https://en.wikipedia.org/wiki/Alpha_diversity

In ecology, alpha diversity (α-diversity) is the mean species diversity in sites or habitats at a ... the mean species diversity in sites or habitats at a more local scale (alpha diversity) and the differentiation among those habitats (beta diversity ).

https://www.coursera.org/lecture/microbiome/beta-diversity-and-visualizing-differences-NOo6W

Video created by University of Colorado Boulder, University of California San Diego for the course "Gut Check: Exploring Your Microbiome". This module ...