University of Oxford,
Department of Zoology
Evolutionary Biology Group
Department of Zoology
University of Oxford
South Parks Road
Oxford OX1 3PS, U.K.
Fax: +44 1865 271249
Home
People
Research
Publications
Software
Data
Links
Introduction
This is a site for various projects in evolutionary biology, molecular evolution and phylogenetic epidemiology being carried out by
members of the research group headed by Paul Harvey
in the
Department of Zoology
at the
University of Oxford.
All email addresses on this web site are drawn using JavaScript. This prevents them being collected for use in spam.
Contents
People
Currrent and past members of the group
Research
Research interests of the group
Publications
Publications produced by the group
Software
Software developed by the group
Data
Data associated with publications
Links
Links to other groups and collaborators
A map of how to find the Zoology Department is available here.
Recent Publications
The genomic and epidemiological dynamics of human influenza A virus
Rambaut A
,
Pybus OG
, Nelson MI, Viboud C, Taubenberger JK &
Holmes EC
(2008)
Nature
0
, 000-000.
Pacing a small cage: mutation and RNA viruses
Belshaw R
, Gardner A,
Rambaut A
&
Pybus OG
(2008)
Trends Ecol Evol
23
, 188-193.
Effects of recombination rate on human endogenous retrovirus fixation and persistence
Katzourakis A
, Pereira V & Tristem M (2007)
J Virol
81
, 10712-10717.
The evolution of genome compression and genomic novelty in RNA viruses
Belshaw R
,
Pybus OG
&
Rambaut A
(2007)
Genome Res
17
, 1496-1504.
Rate of recombinational deletion among human endogenous retroviruses
Belshaw R
, Watson J,
Katzourakis A
, Howe A, Woolven-Allen J, Burt A & Tristem M (2007)
J Virol
81
, 9437-9442.
More Publications
Recent Software
BEAST
BEAST has now moved home to: http://beast.bio.ed.ac.uk
BaTS
A package for measuring phylogeny-trait associations
FigTree
FigTree has now moved home to: http://tree.bio.ed.ac.uk/software/figtree/
Virus Genotyping Tools
The Virus Genotyping Tools allow fast and accurate classification of virus sequences using phylogenetic methods.
TreeStat
TreeStat has now moved home to: http://tree.bio.ed.ac.uk/software/treestat/
More Software
Recent Updates
SHiAT
v1.1
First public release
BaTS
1.0
First public release.
BlastAlign
v1.2
Modified to work with latest version of NCBI BLAST: 2.2.14
BlastAlign
v1.1
Minor bug fixes and improvements
BlastAlign
v1.0
First released version
More Software
Page layout last updated 30 March 2008 by Andrew Rambaut
