Denitrification takes place under special conditions in both terrestrial and marine ecosystems. In general, it occurs where oxygen, a more energetically favourable electron acceptor, is depleted, and bacteria respire nitrate as a substitute terminal electron acceptor. Due to the high concentration of oxygen in our atmosphere, denitrification only takes place in environments where oxygen consumption exceeds the rate of oxygen supply, such as in some soils and groundwater, wetlands, poorly ventilated corners of the ocean, and in seafloor sediments.
Denitrification generally proceeds through some combination of the following intermediate forms:
Or expressed as a redox reaction:
Denitrification is the second step in the nitrification-denitrification process, the conventional way to remove nitrogen from sewage and municipal wastewater. It is also an instrumental process in wetlands and riparian zones for the removal of excess nitrate from groundwater with excess nitrate levels, commonly by extensive agricultural or residential fertiliser usage.
Direct reduction from nitrate to ammonium, a process known as dissimilatory nitrate reduction to ammonium or DNRA, is also possible for organisms that have the nrf-gene. This is less common than denitrification in most ecosystems as a means of nitrate reduction.
Reduction under anoxic conditions can also occur through process called anaerobic ammonia oxidation (Anammox), this reaction is expressed as the following:
In some wastewater treatment plants, small amounts of methanol are added to the wastewater to provide a carbon source for the denitrification bacteria.
Zumft, W.G. (1997): Cell biology and molecular basis of denitrification. In: Microbiol. Mol. Biol. Rev. Bd. 61, Nr. 4, S. 533-616. PMID 9409151 PDF