In 1973, the team started as the Nissan Motors F.C. based in Yokohama, and were promoted to the Japan Soccer League Division 2 in 1976. It took necessary steps like building a friendly relationship with local high schools and universities and starting junior teams for school kids to be a winning team. Under the first paid or professional team manager in Japan Shu Kamo, the team won championships in 1988 and 1989 as well as the JSL Cup and Emperor's Cup winning all three major tournaments in Japan at that time.
In 1991, it was one of the founding members of the J. League. In 1998, after losing one of their primary sponsors, it was announced that crosstown rivals Yokohama Flügels would merge with Marinos. Since then, an F was added to the name to represent the Flügels half of the club. Many Flügels fans rejected the merger and instead created Yokohama F.C., F. Marinos' new crosstown rivals.
The team's home stadiums are Nissan Stadium, otherwise know as International Stadium Yokohama, and Mitsuzawa Stadium. It practices in the newly constructed Marinos Town in the Minato Mirai area of Yokohama.
| Season | League | Place | GP | Pts | Win | Draw | Lose | Average Crowd |
|---|---|---|---|---|---|---|---|---|
| 1993 | J1 1st stage | 3 / 10 | 18 | - | 11 | - | 7 | 16,781 |
| J1 2nd stage | 3 / 10 | 18 | - | 10 | - | 8 | ||
| J1 Total | 4 / 10 | 36 | - | 21 | - | 15 | ||
| 1994 | J1 1st stage | 9 / 12 | 22 | - | 8 | - | 14 | 19,801 |
| J1 2nd stage | 3 / 12 | 22 | - | 14 | - | 8 | ||
| J1 Total | 6 / 12 | 44 | - | 22 | - | 22 | ||
| 1995 | J1 1st stage | Champions / 14 | 26 | 52 | 17 | - | 9 | 18,326 |
| J1 2nd stage | 3 / 14 | 26 | 46 | 15 | - | 11 | ||
| J1 Total | Champions / 14 | 52 | 98 | 32 | - | 20 | ||
| 1996 | J1 | 3 / 16 | 30 | 63 | 21 | - | 9 | 14,589 |
| 1997 | J1 1st stage | 5 / 17 | 16 | 28 | 11 | - | 5 | 9,211 |
| J1 2nd stage | 3 / 17 | 16 | 32 | 12 | - | 4 | ||
| J1 Total | 3 / 17 | 32 | 60 | 23 | - | 9 | ||
| 1998 | J1 1st stage | 4 / 18 | 17 | 32 | 11 | - | 6 | 19,165 |
| J1 2nd stage | 4 / 18 | 17 | 32 | 11 | - | 6 | ||
| J1 Total | 4 / 18 | 34 | 64 | 22 | - | 12 | ||
| 1999 | J1 1st stage | 7 / 16 | 15 | 23 | 8 | 1 | 6 | 20,095 |
| J1 2nd stage | 3 / 16 | 15 | 30 | 10 | 2 | 3 | ||
| J1 Total | 5 / 16 | 30 | 53 | 18 | 3 | 9 | ||
| 2000 | J1 1st stage | Champions / 16 | 15 | 30 | 10 | 0 | 5 | 16,644 |
| J1 2nd stage | 5 / 16 | 15 | 24 | 8 | 1 | 6 | ||
| J1 Total | Runners-up / 16 | 30 | 54 | 18 | 1 | 11 | ||
| 2001 | J1 1st stage | 15 / 16 | 15 | 11 | 3 | 2 | 10 | 20,595 |
| J1 2nd stage | 10 / 16 | 15 | 19 | 6 | 3 | 6 | ||
| J1 Total | 13 / 16 | 30 | 30 | 9 | 5 | 16 | ||
| 2002 | J1 1st stage | Runners-up / 16 | 15 | 33 | 11 | 3 | 1 | 24,108 |
| J1 2nd stage | 6 / 16 | 15 | 22 | 8 | 1 | 6 | ||
| J1 Total | Runners-up / 16 | 30 | 55 | 19 | 4 | 7 | ||
| 2003 | J1 1st stage | Champions / 16 | 15 | 32 | 10 | 2 | 3 | 24,957 |
| J1 2nd stage | Champions / 16 | 15 | 26 | 7 | 5 | 3 | ||
| J1 Total | Champions / 16 | 30 | 58 | 17 | 7 | 6 | ||
| 2004 | J1 1st stage | Champions / 16 | 15 | 36 | 11 | 3 | 1 | 24,818 |
| J1 2nd stage | 6 / 16 | 15 | 23 | 6 | 5 | 4 | ||
| J1 Total | Champions / 16 | 30 | 59 | 17 | 8 | 5 | ||
| 2005 | J1 | 9 / 18 | 34 | 48 | 12 | 12 | 10 | 25,713 |
| 2006 | J1 | 9 / 18 | 34 | 45 | 13 | 6 | 15 | 23,663 |
| 2007 | J1 | 7 / 18 | 34 | 50 | 14 | 8 | 12 | 24,039 |
| 2008 | J1 | ? / 18 |
| Season | Competition | Result | Average Crowd |
|---|---|---|---|
| 1992-93 | Asian Cup Winners Cup | Champions | ? |
| 1996-97 | AFC Champions League | Quarter-finals | ? |
| 2004 | A3 Champions Cup | Runners-up | - |
| 2004 | AFC Champions League | Round 1 | ? |
| 2005 | A3 Champions Cup | 3rd | - |
| 2005 | AFC Champions League | Round 1 | ? |
| Manager | Nat. | Tenure |
|---|---|---|
| Hidehiko Shimizu | 1993-1994 | |
| Jorge Solari | 1995 | |
| Hiroshi Hayano | 1995-1996 | |
| Xabier Azkargorta | 1997-1998 | |
| Antonio de la Cruz | 1999 | |
| Osvaldo Ardiles | 2000-2001 | |
| Yoshiaki Shimojo | 2001 | |
| Sebastião Lazaroni | 2001-2002 | |
| Yoshiaki Shimojo | 2002 | |
| Takeshi Okada | 2003-2006 | |
| Takashi Mizunuma | 2006 | |
| Hiroshi Hayano | 2007 | |
| Takashi Kuwahara | 2008- |
| |- |